Repbase Reports |
|---|
| 2001, Volume 1, Issue 3 |
| March 31, 2001 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 18 |
ATCOPIA87_I |
|||
|---|---|---|---|
Internal region of the ATCOPIA87 copia-like LTR-retrotransposon. |
|||
|
Submitted: 30-Nov-2001 |
Accepted: 30-NOV-2001 |
||
|
Key Words: Copia; LTR Retrotransposon; Transposable Element; ATCOPIA87LTR; ATCOPIA87_I; COPIA superfamily; LTR-retrotransposon; copia-like polyprotein; internal region; reverse transcriptase; the ATCOPIA87 family; internal portion |
|||
|
Source: Arabidopsis thaliana |
Organism: Arabidopsis thaliana |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis |
|
| [] |
Authors: Kapitonov,V.V. and Jurka,J. |
||
|
Title: Internal portion of the ATCOPIA87 copia-like LTR-retrotransposon. |
|||
|
Journal: Repbase Reports 1(3), 18-18 (2001) |
|||
Abstract: ATCOPIA87_I is an internal region of the ATCOPIA87 Copia-like endogenous retrovirus flanked by the 99% identical ATCOPIA87LTR long terminal repeats, and a 5-bp target-site duplication (TAGAC). ATCOPIA87 forms a young family of Copia-like endogenous retroviruses present today in the A. thaliana genome. ATCOPIA87_I encodes well preserved remnants of the 1338-aa ATCOPIA87p Copia-like polyprotein.
|
|||
|
Derived: Positions 25401 29487 Accession No AB028606 GenBank |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||