Repbase Reports
2001, Volume 1, Issue 3
March 31, 2001
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 35

ATREP15

ATREP15 is a non-autonomous DNA transposon - a consensus.

Submitted:
30-Nov-2001 		Accepted:
30-NOV-2001
Key Words:
Helitron; DNA transposon; Transposable Element; Nonautonomous; ATREP superfamily; ATREP15; HELITRON class; nonautonomous DNA transposon
Source:
Arabidopsis thaliana 		Organism:
Arabidopsis thaliana 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
[] Authors:
Kapitonov,V.V.
Title:
ATREP15, a family of non-autonomous HELITRON transposons.
Journal:
Repbase Reports 1(3), 35-35 (2001)
Abstract:
ATREP15 copies are ~95% identical to the consensus sequence. There are ~10 copies of ATREP15 in the genome. ATREP15 shares common structural features with elements from the ATREP superfamily; it is a non-autonomous derivate of HELITRON-like transposons. ATREP15 copies have been inserted into AT target sites without duplications of the sites. There are three minor subfamilies of the ATREP15 family.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Kapitonov,V.V. and Jurka,J.
    Rolling-circle transposons in eukaryotes.
    Proc Natl Acad Sci USA 98(15), 8714-8719 (2001)

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