Repbase Reports

2001, Volume 1, Issue 4
April 30, 2001
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 21

FORDPREFECT_A

Primate FORDPREFECT_A repetitive element - a consensus.

Submitted:
27-Dec-2001
Accepted:
27-DEC-2001
Key Words:
hAT; DNA transposon; Transposable Element; AcHobo family; DNA transposon fossil; FORDPREFECT_A
Source:
Homo sapiens
Organism:
Homo sapiens
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
[] Authors:
Smit,A.F. and Hubley,M.R.
Title:
A few more common, ancient interspersed repeats in the human genome.
Journal:
Repbase Reports 1(4), 21-21 (2001)
Abstract:
FORDPREFECT_A is an internal deletion product of FORDPREFECT. It had (at least) 41 CpG dimers, basically representing a mobile CpG island. Average divergence level of copies to consensus is 27% (22% outside CGs, ~25% substitution level).
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute