Repbase Reports |
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| 2002, Volume 2, Issue 2 |
| February 28, 2002 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3 |
ATCOPIA97I |
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Internal portion of the ATCOPIA97 copia-like LTR-retrotransposon - a fossil. |
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Submitted: 04-Mar-2002 |
Accepted: 04-MAR-2002 |
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Key Words: Copia; LTR Retrotransposon; Transposable Element; ATCOPIA97 family; ATCOPIA97I; ATCOPIA97LTR; COPIA superfamily; LTR-retrotransposon; internal portion; pol; reverse transcriptase |
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Source: Arabidopsis thaliana |
Organism: Arabidopsis thaliana |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: The ATCOPIA97 family of copia-like LTR-retrotransposons. |
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Journal: Repbase Reports 2(2), 3-3 (2002) |
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Abstract: ATCOPIA97I is an internal portion of the ATCOPIA97 Copia-like LTR retrotransposon flanked by 3% divergent LTRs, ATCOPIA97LTR, and 5 bp-long TSDs (CTAAW). ATCOPIA97 is one of ~100 families of Copia-like LTR-retrotransposons, which were active in the A. thaliana genome during last 20 Myrs. A few false stop-codons and a putative long deletion have damaged ORF which encoded originally an intact Copia-like polyprotein.
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Derived: Positions 21264 18131 Accession No AC006436 Genbank |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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