Repbase Reports |
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| 2002, Volume 2, Issue 4 |
| April 30, 2002 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 13 |
HARBINGERN2_DR |
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HARBINGERN2_DR is a nonautonomous DNA transposon - a consensus. |
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Submitted: 02-May-2002 |
Accepted: 02-MAY-2002 |
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Key Words: Harbinger; DNA transposon; Transposable Element; Nonautonomous; 16-bp TIRs; 3-bp TSD; Harbinger superfamily; HARBINGERN2_DR; nonautonomous DNA transposon |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. |
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Title: HARBINGERN2_DR, a nonautonomous DNA transposon from Danio rerio. |
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Journal: Repbase Reports 2(4), 13-13 (2002) |
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Abstract: HARBINGERN2_DR copies are flanked by 3-bp target site duplications (usually TAA) generated upon their integration in the genome. It has perfect 16-bp terminal inverted repeats similar to other HARBINGERs. There are approximately 1000 copies of HARBINGERN2_DR harbored by the zebrafish genome. The consensus sequence was reconstructed based on 11 copies which are ~5% divergent from the consensus sequence.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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