Repbase Reports |
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| 2002, Volume 2, Issue 4 |
| April 30, 2002 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 20 |
LOOPERN2_DR |
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LOOPERN2_DR is a nonautonomous DNA transposon - a consensus. |
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Submitted: 02-May-2002 |
Accepted: 02-MAY-2002 |
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Key Words: DNA transposon; Transposable Element; Nonautonomous; LOOPERN2_DR; nonautonomous DNA transposon |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: LOOPERN2_DR, a nonautonomous DNA transposon from zebrafish. |
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Journal: Repbase Reports 2(4), 20-20 (2002) |
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Abstract: The consensus sequence was reconstructed based on 20 copies present in sequenced DNA that represents ~1% of the genome. Approximately 2000 copies of LOOPERN2_DR are expected to populate the complete zebrafish genome. LOOPERN2_DR copies are ~6% divergent from the consensus sequence. This element is characterized by 14-bp terminal inverted repeats and putative TTAA targets site duplications (or, less likely, TTTAAA). Its classification is not very certain yet, although it is expected to be a member of the piggyBac/Looper superfamily.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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