Repbase Reports |
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| 2002, Volume 2, Issue 5 |
| May 31, 2002 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 20 |
HARBINGERN3_DR |
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HARBINGERN3_DR is a nonautonomous DNA transposon - a consensus. |
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Submitted: 05-Jun-2002 |
Accepted: 05-JUN-2002 |
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Key Words: Harbinger; DNA transposon; Transposable Element; Nonautonomous; 16-bp TIRs; 3-bp TSD; HARBINGERN3_DR; Harbinger/PIF superfamily; nonautonomous DNA transposon |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: HARBINGERN3_DR, a nonautonomous DNA transposon from Danio rerio. |
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Journal: Repbase Reports 2(5), 20-20 (2002) |
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Abstract: HARBINGERN3_DR is an ancient nonautonomous DNA transposon. Putatively, it belongs to the Harbinger/PIF superfamily. HARBINGERN3_DR copies are flanked by 3-bp target site duplications. The consensus sequence has perfect 21-bp terminal inverted repeats. There are approximately 1000 copies of HARBINGERN3_DR in the zebrafish genome; they are ~91% identical with the consensus sequence. This family is composed of minor subfamilies.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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