Repbase Reports

2002, Volume 2, Issue 6
June 30, 2002
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4

DNA14-5-1_DR

DNA14-5-1_DR is a nonautonomous DNA transposon - a consensus.

Submitted:
11-Jul-2002
Accepted:
11-JUL-2002
Key Words:
DNA transposon; Transposable Element; Nonautonomous; DNA14-5-1_DR; Dr000016; nonautonomous DNA transposon
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
DNA14-5-1_DR, a nonautonomous DNA transposon from zebrafish.
Journal:
Repbase Reports 2(6), 4-4 (2002)
Abstract:
This element is characterized by imperfect 14-bp terminal inverted repeats and 5-bp targets site duplications. Its classification is not certain yet, although it is expected to be a member of the TRANSIB superfamily (see description of TRANSIB in drorep.ref). There are ~1000 copies of DNA14-5-1_DR present in the zebrafish genome; they are ~90% identical with the consensus sequence. Unclassified version of DNA14-5-1_DR was identified as the Dr000016 repeat.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Bao,Z.
    Dr000016, an unclassified and uncharacterized repeat.
    http://www.genetics.wustl.edu/fish_lab/repeats/

© 2001-2024 - Genetic Information Research Institute