Repbase Reports

2002, Volume 2, Issue 6
June 30, 2002
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 9

HATN10_DR

HATN10_DR is a nonautonomous DNA transposon - a consensus.

Submitted:
11-Jul-2002
Accepted:
11-JUL-2002
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; Dr000119; Dr000184; Dr000228; HATN10_DR; nonautonomous DNA transposon; hAT superfamily
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
HATN10_DR, an ancient nonautonomous hAT-like DNA transposon from zebrafish.
Journal:
Repbase Reports 2(6), 9-9 (2002)
Abstract:
HATN10_DR is a family of nonautonomous DNA transposons that belongs to the hAT superfamily [2]. Several thousand copies of HATN10_DR are expected to populate the zebrafish genome. The element was active long time ago, its copies are ~12% divergent from the consensus sequence. This element is characterized by 8-bp target site duplications. HATN10_DR has imperfect 16-bp terminal inverted repeats (two mismatches).
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Bao,Z.
    Dr000119, Dr000184 and Dr000228, unclassified and uncharacterized repeats.
    http://www.genetics.wustl.edu/fish_lab/repeats/

© 2001-2024 - Genetic Information Research Institute