Repbase Reports
2003, Volume 3, Issue 4
April 30, 2003
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 84

Tc1-1_AG

Tc1-1_AG is an autonomous DNA transposon - a consensus sequence.

Submitted:
08-May-2003 		Accepted:
08-MAY-2003
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Tc1-1_AG; Topi; Autonomous DNA transposon; mariner/Tc1 superfamily
Source:
Anopheles gambiae 		Organism:
Anopheles gambiae 		Taxonomy:
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Tc1-1_AG, a family of autonomous mariner/Tc1-like DNA transposons from African malaria mosquito.
Journal:
Repbase Reports 3(4), 84-84 (2003)
Abstract:
There are ~50 copies of Tc1-1_AG in the genome. They are ~98% identical to the consensus sequence. This element has 24-bp terminal inverted repeats. This transposon is inserted preferentially into the GTAC target site (the TA target site duplication). Tc1-1_AG encodes the 332-aa Tc1-1_AGp transposase (pos. 272-1267). RADPFKTCTRIKQELGLQVSAKTVSRRLHAAGFCARRPRKVRKLxPHHVEARIRFAEEHLAASIFWWSKI IFSDESRINLDGSDGIKYVWRFPNQAYHPKNTIKTLSHGGGHVMVWGCFSWHGTGPLFRINGTLNSEGYR KILSRKMLPYARQQFGDEEHYIFQHDNDSKHTSRTVKCYLANQDVQVLPWPALSPDLNPIENLWSTLKRQ LKNQPARSADDLWTRCKVMWERIxRSECRNLIGDMAKRCQEVIANNGHQIDR.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Grossman,L.G., Cornel,J.A., Salazar-Rafferty,C., Robertson,M.H. and Collins,H.F.
    Tsessebe, Topi and Tiang: Three distinct subfamilies of Tc1-like transposable elements in the malaria vector, Anopheles gambiae.
    Direct Submission to Genbank (JAN-1999)

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