Repbase Reports |
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| 2003, Volume 3, Issue 9 |
| September 30, 2003 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 179 |
HARBINGER2N_DR |
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HARBINGER2N_DR is a nonautonomous DNA transposon - a consensus. |
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Submitted: 08-Oct-2003 |
Accepted: 08-OCT-2003 |
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Key Words: Harbinger; DNA transposon; Transposable Element; Nonautonomous; 13-bp TIRs; 3-bp TSD; Harbinger superfamily; HARBINGER2N_DR; HARBINGER2_DR; nonautonomous DNA transposon |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: HARBINGER2N_DR, a young family of nonautonomous Harbinger DNA transposons from Danio rerio. |
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Journal: Repbase Reports 3(9), 179-179 (2003) |
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Abstract: HARBINGER2N_DR copies are flanked by 3-bp target site duplications (usually CWG) generated upon their integration in the genome. It has perfect 13-bp terminal inverted repeats similar to other HARBINGERs. There are approximately 100 copies of HARBINGER2N_DR harbored by the zebrafish genome. The consensus sequence was reconstructed based on 25 copies which are ~0.6% divergent from the consensus sequence. HARBUNGER2N_DR elements were derived from the autonomous HARBINGER2_DR transposon.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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