Repbase Reports |
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| 2004, Volume 4, Issue 11 |
| November 30, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 290 |
DNA2-2_DR |
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DNA2-2_DR is a family of nonautonomous DNA transposons. |
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Submitted: 07-Dec-2004 |
Accepted: 07-DEC-2004 |
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Key Words: hAT; DNA transposon; Transposable Element; Nonautonomous; DNA2-2_DR; nonautonomous DNA transposon; TA target site duplication; hAT-N18_DR |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: DNA2-2_DR, a family of nonautonomous DNA transposons. |
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Journal: Repbase Reports 4(11), 290-290 (2004) |
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Abstract: The genome harbors several thousand copies of DNA2-2_DR that are ~95% identical to their consensus sequence (~100 copies were transposed as a portion of the hAT-N18 element). DNA2-2_DR elements are characterized by the TA target site duplications and 14-bp terminal inverted repeats. Additionally, the 3' terminus contains a 63-bp palindrome (pos. 718-780). DNA2-2_DR elements are also characterized by a high target-site specificity. They are inserted preferentially into the cawTAwtg target-sites (TA -is a target site duplication). Classification of DNA2-2_DR is not certain yet, although it is expected to be a member of the Mariner/Tc1 superfamily.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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