Repbase Reports |
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| 2004, Volume 4, Issue 11 |
| November 30, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 306 |
hAT-N18_DR |
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hAT-N18_DR is a nonautonomous DNA transposon - a consensus. |
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Submitted: 07-Dec-2004 |
Accepted: 07-DEC-2004 |
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Key Words: hAT; DNA transposon; Transposable Element; Nonautonomous; CHARLIE3; DNA2-2_DR; nonautonomous DNA transposon; hAT superfamily; hAT-N18_DR; horizontal transfer |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: hAT-N18_DR, a family of nonautonomous DNA transposons from zebrafish. |
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Journal: Repbase Reports 4(11), 306-306 (2004) |
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Abstract: hAT-N18_DR is a family of nonautonomous DNA transposons that belongs to the hAT superfamily. This transposable element is characterized by 8-bp target site duplications and 15-bp terminal inverted repeats . hAT-N18_DR is a composite transposon: its internal portion (pos. 607-1219) is a copy of the DNA2-2_DR transposon (pos. 1-615). The 70-bp termini of hAT-N18 and hAT-N19 are 90% identical to each other. The primate CHARLIE3 hAT transposon is 78% identical to the hAT-N18 consensus sequence, excluding the DNA2-2_DR copy. Such high identity indicates the horizontal transfer.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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