Repbase Reports |
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| 2004, Volume 4, Issue 12 |
| December 31, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 311 |
ERVN1-I_DR |
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An internal portion of the ERVN1_DR nonautonomous endogenous retrovirus - a consensus sequence. |
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Submitted: 07-Jan-2005 |
Accepted: 07-JAN-2005 |
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Key Words: Endogenous Retrovirus; Transposable Element; Nonautonomous; ERVN1-I_DR; ERVN1-LTR_DR; ERVN1_DR; nonautonomous LTR retrotransposon |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: ERVN1_DR, a miniature nonautonomous endogenous retrovirus. |
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Journal: Repbase Reports 4(12), 311-311 (2004) |
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Abstract: ERVN1-I_DR is an internal portion of the ERVN1_DR miniature nonautonomous endogenous retrovirus. Long terminal repeat of ERVN1_DR is deposited in Repbase as ERVN1-LTR_DR. Some copies of ERVN1_DR are flanked by identical LTRs. Average identity of ERVN1-I_DR copies to their consensus sequence is above 96%. The internal contains PBS complementary to the Phe-tRNA. ERVN1_DR is characterized by 5-bp target site duplications. Since there are no autonomous LTR retrotransposons similar to ERVN1_DR, its exact classification is not possible.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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