Repbase Reports |
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| 2004, Volume 4, Issue 12 |
| December 31, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 315 |
Gypsy11-I_DR |
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An internal portions of the Gypsy11_DR LTR retrotransposon - a consensus sequence. |
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Submitted: 07-Jan-2005 |
Accepted: 07-JAN-2005 |
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Key Words: Gypsy; LTR Retrotransposon; Transposable Element; Gypsy superfamily; Gypsy11-I_DR; Gypsy11-LTR_DR; Gypsy11_DR; endogenous retrovirus; gag; integrase; reverse transcriptase |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Gypsy11_DR, an LTR retrotransposon from zebrafish. |
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Journal: Repbase Reports 4(12), 315-315 (2004) |
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Abstract: Gypsy11-I_DR is an internal portion of the Gypsy11_DR LTR retrotransposon that belongs to the Gypsy superfamily. Its long terminal repeat is deposited in Repbase as Gypsy11-LTR_DR. Gypsy11_DR is characterized by 4-bp target site duplications. The internal portion encodes one 2006-aa polyprotein composed of gag, protease, reverse transcriptase, and integrase domains (pos. 132-6149). PBS is complementary to Pro-tRNA.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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