Repbase Reports

2004, Volume 4, Issue 12
December 31, 2004
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 334

hAT-2n1_DR

A nonautonomous hAT transposon - a consensus sequence.

Submitted:
07-Jan-2005
Accepted:
07-JAN-2005
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; ERVN1-LTR_DR; hAT superfamily; hAT-2_DR; hAT-2n1_DR; nonautonomous DNA transposon
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
hAT-2n1_DR, a nonautonomous DNA transposon that contains a retroviral LTR.
Journal:
Repbase Reports 4(12), 334-334 (2004)
Abstract:
hAT-2n1_DR is a composite nonautonomous hAT transposon. Its copies are ~97% identical to the consensus sequence. They are flanked by 8-bp target site duplications. hAT-2_DR was an autonomous element hAT-2n1_DR was derived from. The consensus sequences of these transposons are 97% identical. A portion of hAT-2n1_DR (pos. 323-649) that is not similar to hAT-2_DR is the ERVN1-LTR_DR long terminal repeat.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute