Repbase Reports |
|---|
| 2004, Volume 4, Issue 4 |
| April 30, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 102 |
Copia1-I_CR |
|||
|---|---|---|---|
Internal portion of the Copia1_CR retrotransposon. |
|||
|
Submitted: 13-May-2004 |
Accepted: 13-MAY-2004 |
||
|
Key Words: Copia; LTR Retrotransposon; Transposable Element; 5-bp TSDs; Copia1-I_CR; Copia1-LTR_CR; COPIA superfamily; endonuclease; protease; reverse transcriptase |
|||
|
Source: Chlamydomonas reinhardtii |
Organism: Chlamydomonas reinhardtii |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas |
|
| [] |
Authors: Kapitonov,V.V. and Jurka,J. |
||
|
Title: Copia1_CR, a family of copia LTR retrotransposons present in the Chlamydomonas reinhardtii genome. |
|||
|
Journal: Repbase Reports 4(4), 102-102 (2004) |
|||
Abstract: Copia1-I_CR is an internal portion of the Copia1-CR LTR retrotransposon, whose LTR is deposited in Repbase as Copia1-LTR_CR. Copia1-I encodes a 1627 Copia1_CRp polyprotein (pos. 435-5315) composed of the C2HC zinc finger, protease, endonuclease, reverse transcriptase, RNase H. The PBS is complementary to an internal portion of tRNA Met.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||