Repbase Reports

2004, Volume 4, Issue 4
April 30, 2004
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 106

Copia3-I_CR

Internal portion of the Copia3_CR retrotransposon.

Submitted:
13-May-2004
Accepted:
13-MAY-2004
Key Words:
Copia; LTR Retrotransposon; Transposable Element; 5-bp TSDs; Copia3-I_CR; Copia3-LTR_CR; COPIA superfamily; endonuclease; protease; reverse transcriptase
Source:
Chlamydomonas reinhardtii
Organism:
Chlamydomonas reinhardtii
Taxonomy:
Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Copia3_CR, a family of copia LTR retrotransposons present in the Chlamydomonas reinhardtii genome.
Journal:
Repbase Reports 4(4), 106-106 (2004)
Abstract:
Copia3-I_CR is an internal portion of the Copia3-CR LTR retrotransposon, whose LTR is deposited in Repbase as Copia3-LTR_CR. Copia3-I encodes a 1670 Copia3_CRp polyprotein (pos. 69-5078) composed of the C2HC zinc finger, protease, endonuclease, reverse transcriptase, RNase H. The PBS is complementary to an internal portion of tRNA Met.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute