Repbase Reports |
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| 2004, Volume 4, Issue 4 |
| April 30, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 120 |
SINEX-4_CR |
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SINEX-4_CR is a putative nonautonomous non-LTR retrotransposon - a consensus. |
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Submitted: 13-May-2004 |
Accepted: 13-MAY-2004 |
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Key Words: SINE; Non-LTR Retrotransposon; Transposable Element; Nonautonomous; SINEX-4_CR; nonautonomous non-LTR retrotransposon |
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Source: Chlamydomonas reinhardtii |
Organism: Chlamydomonas reinhardtii |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: SINEX-4_CR, a putative SINE-like non-LTR retrotransposon from the green algae genome. |
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Journal: Repbase Reports 4(4), 120-120 (2004) |
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Abstract: About 30 copies of SINEX-4_CR are present in the C. reinhardtii genome. They are ~99% identical to the consensus sequence. Usually SINEX-4_CR are flanked by 11-15-bp target site duplications. Th 58-bp 3' terminus of SINEX-4_CR is 91% identical to that of SINEX-1_CR. The putative Pol III internal promoter (pos. 50-73) was derived from tRNA. This region is similar to the Pol III promoter of RATHE2 (pos. 55-78), a SINE element identified in the A. thaliana genome (GenBank, AY033702).
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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