Repbase Reports |
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| 2004, Volume 4, Issue 7 |
| July 31, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 198 |
RandI-3 |
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RandI-3 is a family of non-LTR retrotransposons - a consensus sequence. |
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Submitted: 17-Aug-2004 |
Accepted: 17-AUG-2004 |
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Key Words: RandI; Non-LTR Retrotransposon; Transposable Element; AP endonuclease; RNaseH; RandI superfamily; RandI-3; reverse transcriptase |
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Source: Chlamydomonas reinhardtii |
Organism: Chlamydomonas reinhardtii |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: RandI-3, a family of RandI non-LTR retrotransposons from the Chlamydomonas reinhardtii genome. |
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Journal: Repbase Reports 4(7), 198-198 (2004) |
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Abstract: RandI-3 is a family of RandI non-LTR retrotransposons. Approximately 20 copies of RandI-3 are present in the genome. They are ~1% divergent from the consensus sequence and are likely mobile. The RandI-3 elements are usually flanked by 10-15-bp target site duplications. The consensus sequence encodes the 3671 RandI-3p protein (nucleotide pos. 98-11110) composed of the AP endonuclease (aa pos. 1030-1300), reverse transcriptase (aa pos. 1650-2000), and RNase H1 (aa pos. 3170-3340) domains.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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