Repbase Reports |
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| 2004, Volume 4, Issue 9 |
| September 30, 2004 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 226 |
GYPSY1-LTR_CB |
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GYPSY1-LTR_CB is a long terminal repeat of the GYPSY1_CB LTR retrotransposon - a consensus. |
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Submitted: 22-Oct-2004 |
Accepted: 22-OCT-2004 |
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Key Words: Gypsy; LTR Retrotransposon; Transposable Element; 5bp TSDs; GYPSY1-I_CB; GYPSY1-LTR_CB; Gypsy clade; LTR; RNase-H; gag; integrase; mag lineage; protease; reverse transcriptase |
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Source: Caenorhabditis briggsae |
Organism: Caenorhabditis briggsae |
Taxonomy: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis |
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Authors: Pavlicek,A. and Jurka,J. |
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Title: GYPSY1_CB - a young family of autonomous LTR retrotransposons. |
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Journal: Repbase Reports 4(9), 226-226 (2004) |
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Abstract: GYPSY1-LTR_CB Copies are 99% identical to the consensus. Flanked by 5bp-long target duplications. GYPSY1_CB is related to GYPSY21-I_AG, GYPSY3-I_AG, and GYPSY18-I_AG. Last 24bp code for N-terminal part of the gap-pol polyprotein. The internal sequence is listed as GYPSY1-I_CB.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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