Repbase Reports
2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 298

COPI2_I

Copia-type LTR-retrotransposon from O. sativa (internal portion).

Submitted:
10-Oct-2005 		Accepted:
17-OCT-2005
Key Words:
Copia; LTR Retrotransposon; Transposable Element; Interspersed repeat; COPI2_LTR; internal portion; COPI2_I
Source:
Oryza sativa 		Organism:
Oryza sativa 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
[] Authors:
Jurka,J.
Title:
Copi2: Identification of a new Copia-type LTR retrotransposon from rice.
Journal:
Repbase Reports 5(10), 298-298 (2005)
Abstract:
Similarity of the protein-coding portion to Copia-type LTR retrotransposon was noted in ref. 1 but the proposed ORF goes beyond the 3' LTR region. Classification and exact coordinates are reported in this entry. LTRs are >99% identical (one substitution and one indel).
Derived:
Positions 146856 151002 Accession No AC116368 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Buell,C., Yuan,Q., Ouyang,S., Liu,J., Wang,A., Maiti,R., Lin,H., Zhu,W., Hamilton,J., Jones,K., Tallon,L. et al.
    None.
    Unpublished (2005)

© 2001-2024 - Genetic Information Research Institute