Repbase Reports
2005, Volume 5, Issue 11
November 30, 2005
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 367

ERV21_MD_I

ERV21_MD, an endogenous class 1 retrovirus from Monodelphis domestica - consensus of internal sequence.

Submitted:
14-Nov-2005 		Accepted:
02-DEC-2005
Key Words:
ERV1; Endogenous Retrovirus; Transposable Element; Interspersed repeat; ERV21_MD_I
Source:
Monodelphis domestica 		Organism:
Monodelphis domestica 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[] Authors:
Gentles,A. and Jurka,J.
Title:
ERV21_MD, an ERV1 class endogenous retrovirus from the opossum M. domestica.
Journal:
Repbase Reports 5(11), 367-367 (2005)
Abstract:
Around 20 full length copies of this internal region in the genome have average similarity to consensus of ~95-96%. Despite this, no intact ORFs were reconstructed. The 465 LTR is ERV21_MD_LTR. Elements are flanked by 4 bp TSDs. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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