Repbase Reports
2005, Volume 5, Issue 11
November 30, 2005
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 399

NERV1_MD_I

NERV1_MD, a non-autonomous endogenous class 1 retrovirus-like element from Monodelphis domestica - consensus of internal sequence.

Submitted:
14-Nov-2005 		Accepted:
17-NOV-2005
Key Words:
ERV1; Endogenous Retrovirus; Transposable Element; Interspersed repeat; NERV1_MD_I
Source:
Monodelphis domestica 		Organism:
Monodelphis domestica 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[] Authors:
Gentles,A. and Jurka,J.
Title:
NERV1_MD, a non-autonomous ERV1 class retroelement from the opossum M. domestica.
Journal:
Repbase Reports 5(11), 399-399 (2005)
Abstract:
This non-autonomous element has characteristic internal/LTR regions of an ERV, but has no coding capacity. It is most similar to ERV18_MD, hence the designation as ERV1. Unusually for Monodelphis ERVs, the target site duplications are 3 bp. Copies are numerous and ~90% similar to the consensus. The autonomous counterpart is not identified. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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