Repbase Reports
2005, Volume 5, Issue 12
December 31, 2005
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 435

LTR116_MD

LTR116_MD, a family of retroviral long terminal repeats from Monodelphis domestica - consensus.

Submitted:
09-Dec-2005 		Accepted:
09-DEC-2005
Key Words:
Endogenous Retrovirus; Transposable Element; Interspersed repeat; LTR116_MD
Source:
Monodelphis domestica 		Organism:
Monodelphis domestica 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[] Authors:
Gentles,A. and Jurka,J.
Title:
LTR116_MD, a family of long terminal repeats from the opossum M. domestica.
Journal:
Repbase Reports 5(12), 435-435 (2005)
Abstract:
LTR116_MD is a non-autonomous LTR element, probably of an ERV. Average similarity of copies to the consensus is around 83%. The internal region corresponding to this LTR is unknown. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

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