Repbase Reports |
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| 2005, Volume 5, Issue 4 |
| April 30, 2005 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 97 |
SINE2-3_SP |
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A family of SINE retrotransposons - a consensus sequence. |
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Submitted: 29-Apr-2005 |
Accepted: 29-APR-2005 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; Nonautonomous; Interspersed repeat; SINE2-3_SP; conserved; CNE |
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Source: Strongylocentrotus purpuratus |
Organism: Strongylocentrotus purpuratus |
Taxonomy: Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: SINE2-3_SP, a family of SINE2 retrotransposons in the sea urchin genome. |
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Journal: Repbase Reports 5(4), 97-97 (2005) |
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Abstract: The genome harbors ~4000 copies of SINE2-3_SP elements.The consensus sequence represents a major young family of SINE2-3_SP elements (they are >95% identical to the consensus sequence). The 70-bp 5' terminus was derived from a Lys tRNA pol III region. The autonomous non-LTR retrotransposon involved in proliferation of SINE2-3_SP is not known yet. Given the lack of target site duplications and 3' microsatellites in SINE2-3_SP, the unknown autonomous element is expected to be a member of the CR1 clade.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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