Repbase Reports |
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| 2005, Volume 5, Issue 5 |
| May 31, 2005 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 129 |
RETROFIT3_LTR |
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Rice copia-type LTR retrotransposon RETROFIT3_LTR, long terminal repeat. |
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Submitted: 28-May-2005 |
Accepted: 03-JUN-2005 |
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Key Words: Copia; LTR Retrotransposon; Transposable Element; Interspersed repeat; RETROFIT; RETROFIT2; RETROFIT3_LTR |
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Source: Oryza sativa |
Organism: Oryza sativa |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza |
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Authors: Jurka,J. |
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Title: Copia-type RETROFIT3 LTR retrotransposon. |
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Journal: Repbase Reports 5(5), 129-129 (2005) |
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Abstract: RETROFIT3 is ~69% identical to RETROFIT2 and 73% to RETROFIT It appears to have intact protein-coding ORF and there is only a single mutation between LTRs of RETROFIT3. However, similarities to other RETROFIT LTRs are lower, sometimes undetectable.
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Derived: Positions 77572 77248 Accession No AL713928 Genbank |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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