Repbase Reports
2005, Volume 5, Issue 6
June 30, 2005
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 142

HAT12_CB

HAT12_CB - a family of nonautonomous hAT-like transposons.

Submitted:
30-Jun-2005 		Accepted:
30-JUN-2005
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; Cb000400; HAT12_CB
Source:
Caenorhabditis briggsae 		Organism:
Caenorhabditis briggsae 		Taxonomy:
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
[] Authors:
Pavlicek,A. and Jurka,J.
Title:
HAT12_CB - a family of nonautonomous hAT-like transposons.
Journal:
Repbase Reports 5(6), 142-142 (2005)
Abstract:
The consensus sequence was reconstructed from the Ensembl genome annotation. Copies are 87% identical to the consensus. HAT12_CB contains 14bp-long TIRs and is flanked by 8bp target duplications. Distantly similar to HAT11_CB and HAT1_CB. The internal part is similar to MARINER38C_CB.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Stein,L.D., Bao,Z., Blasiar,D., Blumenthal,T., Brent,M.R., Chen,N., Chinwalla,A., Clarke,L., Clee,C., Coghlan,A. et al.
    The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
    PLoS Biol 1(2), E45-E45 (2003)

© 2001-2024 - Genetic Information Research Institute