Repbase Reports
2006, Volume 6, Issue 1
January 31, 2006
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 5

Gypsy4-I_AO

An internal portion of the Gypsy4_AO LTR retrotransposon - a consensus sequence.

Submitted:
25-Jan-2006 		Accepted:
02-FEB-2006
Key Words:
Gypsy; LTR Retrotransposon; Transposable Element; Gypsy4_AO; Gypsy4-LTR_AO; Gypsy4-I_AO
Source:
Aspergillus oryzae 		Organism:
Aspergillus oryzae 		Taxonomy:
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Gypsy4_AO, a family of Gypsy LTR retrotransposons in the Aspergillus oryzae genome.
Journal:
Repbase Reports 6(1), 5-5 (2006)
Abstract:
This is an internal portion of the Gypsy4_AO LTR retrotransposon. Its long terminal repeat is Gypsy4-LTR_AO. The only ORF encodes a 1999-aa Gypsy4_AOp polyprotein composed of the gag, zinc knuckle, protease, RT, integrase and chromo domains.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Galagan,J.E., Calvo,S.E., Cuomo,C., Ma,L.J., Wortman,J.R., Batzoglou,S., Lee,S.I., Spevak,C.C., Basturkmen,M. et al.
    Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.
    Nature 438(7071), 1105-1115 (2005)

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