Repbase Reports
2006, Volume 6, Issue 1
January 31, 2006
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 9

I-1_AO

A family of I non-LTR retrotransposons - a consensus sequence.

Submitted:
24-Jan-2006 		Accepted:
02-FEB-2006
Key Words:
I; Non-LTR Retrotransposon; Transposable Element; I-1_AO
Source:
Aspergillus oryzae 		Organism:
Aspergillus oryzae 		Taxonomy:
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
I-1_AO, a family of I non-LTR retrotransposons in the Aspergillus oryzae genome.
Journal:
Repbase Reports 6(1), 9-9 (2006)
Abstract:
This is a family of non-LTR retrotransposons that belong to the I clade. I-1_AO is 5' truncated, ORF2 that is composed of the endonuclease, reverse transcriptase and RNase H domains is relatively well preserved (just a few stop codons). The 3' terminus is composed of the TTGA microsatellite. Usually, I-1_AO elements are severely truncated at their 5' ends, and they are flanked by 10-15-bp target site duplications.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Galagan,J.E., Calvo,S.E., Cuomo,C., Ma,L.J., Wortman,J.R., Batzoglou,S., Lee,S.I., Spevak,C.C., Basturkmen,M. et al.
    Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.
    Nature 438(7071), 1105-1115 (2005)

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