Repbase Reports
2006, Volume 6, Issue 1
January 31, 2006
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 35

MARINER64_CB

Caenorhabditis briggsae family of DNA transposons - a consensus.

Submitted:
06-Jan-2006 		Accepted:
06-JAN-2006
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Cb000065; MARINER64_CB
Source:
Caenorhabditis briggsae 		Organism:
Caenorhabditis briggsae 		Taxonomy:
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
[] Authors:
Pavlicek,A. and Jurka,J.
Title:
MARINER64_CB - a family of nonautonomous mariner/Tc1-like transposon.
Journal:
Repbase Reports 6(1), 35-35 (2006)
Abstract:
The consensus sequence was reconstructed from the Ensembl genome annotation. Copies are 90% identical to the consensus. MARINER64_CB is flanked by TA target duplications and contains ~30bp-long TIRs. The central part is ~80% similar to Mariner-N1_CB, but termini are different.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Stein,L.D., Bao,Z., Blasiar,D., Blumenthal,T., Brent,M.R., Chen,N., Chinwalla,A., Clarke,L., Clee,C., Coghlan,A. et al.
    The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
    PLoS Biol 1(2), 166-192 (2003)

© 2001-2024 - Genetic Information Research Institute