Repbase Reports
2006, Volume 6, Issue 1
January 31, 2006
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 37

MARINER66_CB

Caenorhabditis briggsae family of DNA transposons - a consensus.

Submitted:
06-Jan-2006 		Accepted:
02-FEB-2006
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Cb000214; MARINER66_CB
Source:
Caenorhabditis briggsae 		Organism:
Caenorhabditis briggsae 		Taxonomy:
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
[] Authors:
Pavlicek,A. and Jurka,J.
Title:
MARINER66_CB - a family of nonautonomous mariner/Tc1-like transposons.
Journal:
Repbase Reports 6(1), 37-37 (2006)
Abstract:
The consensus sequence was reconstructed from the Ensembl genome annotation. Copies are 93% identical to the consensus. MARINER66_CB contains 29bp-long perfect TIRs similar to TCB1 and has a palindromic structure. Flanked by TA target duplications.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Stein,L.D., Bao,Z., Blasiar,D., Blumenthal,T., Brent,M.R., Chen,N., Chinwalla,A., Clarke,L., Clee,C., Coghlan,A. et al.
    The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
    PLoS Biol 1(2), 166-192 (2003)

© 2001-2024 - Genetic Information Research Institute