Repbase Reports
2006, Volume 6, Issue 1
January 31, 2006
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 29

Mariner1_AO

DNA transposon, Mariner superfamily, Tc1 clade - a consensus sequence.

Submitted:
24-Jan-2006 		Accepted:
02-FEB-2006
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Mariner1_AO
Source:
Aspergillus oryzae 		Organism:
Aspergillus oryzae 		Taxonomy:
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Mariner1_AO, a family of Mariner/Tc1 DNA transposons in the Aspergillus oryzae genome.
Journal:
Repbase Reports 6(1), 29-29 (2006)
Abstract:
This is a family of Mariner DNA transposons (Tc1 clade). It is 74% identical to Tao1 (491 mismatches: 450 transitions and 0 gaps). This transposon is a fine example of a strong RIP and fast RIP-induced change of the AT content (from 60% in Tao1 to 82% in Mariner1_AO). A transposase-coding ORF is destroyed by many stop-codon introduced by RIP.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Galagan,J.E., Calvo,S.E., Cuomo,C., Ma,L.J., Wortman,J.R., Batzoglou,S., Lee,S.I., Spevak,C.C., Basturkmen,M. et al.
    Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.
    Nature 438(7071), 1105-1115 (2005)

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