Repbase Reports
2006, Volume 6, Issue 3
March 31, 2006
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 127

LTR122_MD

LTR122_MD, a putative long terminal repeats from Monodelphis domestica - consensus.

Submitted:
03-Mar-2006 		Accepted:
03-MAR-2006
Key Words:
Endogenous Retrovirus; Transposable Element; Interspersed repeat; LTR122_MD
Source:
Monodelphis domestica 		Organism:
Monodelphis domestica 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
[] Authors:
Gentles,A. and Jurka,J.
Title:
LTR122_MD, a putative long terminal repeat from the opossum M. domestica.
Journal:
Repbase Reports 6(3), 127-127 (2006)
Abstract:
LTR122_MD is a non-autonomous LTR element, probably of an ERV. Average similarity of copies to the consensus is around 91%. It has non-canonical termini, and 5 or 6 bp target site duplications. The internal region corresponding to this LTR is unknown. This consensus was reconstructed from the June 2005 release of the 6.8X WGS sequence.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. The Broad Institute of MIT and Harvard, Cambridge, MA, USA. Monodelphis domestica sequencing consortium
    Monodelphis domestica WGS sequence.
    Initial data release, version 2

© 2001-2024 - Genetic Information Research Institute