Repbase Reports |
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| 2006, Volume 6, Issue 5 |
| May 31, 2006 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 258 |
MarinerL-1_CR |
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MarinerL-1_CR is a family of nonautonomous Mariner DNA transposons - a consensus sequence. |
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Submitted: 08-Jun-2004 |
Accepted: 31-MAY-2006 |
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Key Words: Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; mariner; Interspersed repeat; MarinerL-1_CR |
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Source: Chlamydomonas reinhardtii |
Organism: Chlamydomonas reinhardtii |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: MarinerL-1_CR, a family of nonautonomous Mariner transposons in the Chlamydomonas reinhardtii genome. |
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Journal: Repbase Reports 6(5), 258-258 (2006) |
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Abstract: MarinerL-1_CR likely belongs to a family of Mariner nonautonomous transposons. The consensus sequences is still incomplete because of assembly problems. This transposon is active, it characterized by 2-bp target site duplications. Like other transposable elements in the chlamy genome, MarinerL-1_CR is GC-rich; as a result, it contains long ORFs that most likely do not code for any real proteins. This element is probably still transposable (over 99% identity between different copies). The 49-bp 5' and 100-bp 3' termini of MarinerL-1_CR are 84% and 96% identical to the left end of Tcr3 [1].
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Derived: [2] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References:
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