Repbase Reports |
|---|
| 2006, Volume 6, Issue 9 |
| September 30, 2006 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 449 |
Harbinger-N11_XT |
|||
|---|---|---|---|
A nonautonomous family of Harbinger transposons - a consensus. |
|||
|
Submitted: 29-Sep-2006 |
Accepted: 02-OCT-2006 |
||
|
Key Words: Harbinger; DNA transposon; Transposable Element; Nonautonomous; Interspersed repeat; non-autonomous; Harbinger-N11_XT |
|||
|
Source: Xenopus tropicalis |
Organism: Xenopus tropicalis |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana |
|
| [] |
Authors: Kapitonov,V.V. and Jurka,J. |
||
|
Title: Harbinger-N11_XT, a family of nonautonomous Harbinger DNA transposons from frog. |
|||
|
Journal: Repbase Reports 6(9), 449-449 (2006) |
|||
Abstract: The genome contains several thousand copies of the Harbinger-N11_XT nonautonomous DNA transposons. They are characterized by the 37-bp TIRs and 3-bp TWA target site duplications. Sometimes they form doublets. Given that some copies are identical to each other, this family might be still mobile. Among 6375 full-size copies identified in the sequenced genome, only 241 copies are less than 85% identical to the consensus sequence.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||