Repbase Reports |
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| 2006, Volume 6, Issue 9 |
| September 30, 2006 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 463 |
hAT-12N1A_XT |
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A nonautonomous family of hAT transposons - a consensus. |
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Submitted: 29-Sep-2006 |
Accepted: 29-SEP-2006 |
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Key Words: hAT; DNA transposon; Transposable Element; Nonautonomous; Interspersed repeat; non-autonomous; hAT-12_XT; hAT-12N1_XT; hAT-12N1A_XT |
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Source: Xenopus tropicalis |
Organism: Xenopus tropicalis |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: hAT-12N1A_XT, a family of nonautonomous hAT DNA transposons from frog. |
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Journal: Repbase Reports 6(9), 463-463 (2006) |
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Abstract: The genome contains several thousand copies of the hAT-12N1A_XT nonautonomous DNA transposon. These copies have been transposed relatively long time ago (they are 10% divergent from the consensus sequence). This transposon is characterized by 8-bp TSDs and 19-bp TIRs. The hAT-12N1A_XT family have been transposed by a transposase encoded by autonomous transposons ancestral to hAT-12_XT. The hAT-12N1A_XT and hAT-12_XT consensus sequences share the 90% identical ~110-bp and 90-bp 5' and 3' termini.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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