Repbase Reports

2007, Volume 7, Issue 1
January 31, 2007
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 57

SHACOP15_I_MT

Internal region of LTR retroposon, SHACOP15_MT, from Medicago truncatula.

Submitted:
25-Jan-2007
Accepted:
25-JAN-2007
Key Words:
Copia; LTR Retrotransposon; Transposable Element; LTR; retroposon; Internal; Interspersed; repeat; ORF; peptidase; integrase; SHACOP15_I_MT
Source:
Medicago truncatula
Organism:
Medicago truncatula
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
[] Authors:
Shankar,R. and Jurka,J.
Title:
SHACOP15_MT: LTR retroposon from barrel medic.
Journal:
Repbase Reports 7(1), 57-57 (2007)
Abstract:
The internal region has intact domains for gag-pol polyprotein with integrase and cysteine peptidase. This internal element is present in three complete and intact copies in the genome and exhibits Copia-like arrangement for various domains.
Derived:
Positions 33334 37485 Accession No CR931743 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute