Repbase Reports |
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| 2007, Volume 7, Issue 1 |
| January 31, 2007 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 73 |
SHACOP3_I_MT |
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Internal region of LTR retroposon, SHACOP3_MT, from Medicago truncatula. |
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Submitted: 12-Jan-2007 |
Accepted: 21-JAN-2007 |
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Key Words: Copia; LTR Retrotransposon; Transposable Element; LTR; retroposon; internal region; Interspersed; repeat; ORF; polyprotein; SHACOP3_I_MT |
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Source: Medicago truncatula |
Organism: Medicago truncatula |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago |
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Authors: Shankar,R. and Jurka,J. |
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Title: SHACOP3_MT: LTR retroposon from barrel medic. |
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Journal: Repbase Reports 7(1), 73-73 (2007) |
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Abstract: The internal region is complete and intact. It is present in 5-6 complete copies in the Medicago genome. It has a single frame in which intact domains of gag,integrase,pol and CCHC zinc finger motif are present. On both sides it is flanked by intact LTRs which are highly identical to COP4_MT LTRs (>90%).
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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