Repbase Reports |
|---|
| 2007, Volume 7, Issue 1 |
| January 31, 2007 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 86 |
SHAGY_I_MT |
|||
|---|---|---|---|
Internal region of gypsy -like LTR retroposon, SHAGY_MT, from Medicago truncatula. |
|||
|
Submitted: 12-Jan-2007 |
Accepted: 12-JAN-2007 |
||
|
Key Words: Gypsy; LTR Retrotransposon; Transposable Element; LTR; retroposon; internal region; Interspersed; repeat; ORF; SHAGY_I_MT |
|||
|
Source: Medicago truncatula |
Organism: Medicago truncatula |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago |
|
| [] |
Authors: Shankar,R. and Jurka,J. |
||
|
Title: SHAGY_MT: LTR retroposon from barrel medic. |
|||
|
Journal: Repbase Reports 7(1), 86-86 (2007) |
|||
Abstract: The internal region has two different reading frames. The first frame has intact domain for retroelement gag protein while the second reading frame has intact domains of RT polymerase followed by integrase, a hallmark of Gypsy-like LTR retroposons. The complete sequence is present in few copies.
|
|||
|
Derived: Positions 73183 78431 Accession No AC136141 EMBL/GenBank/DDBJ |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||