Repbase Reports |
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| 2007, Volume 7, Issue 11 |
| November 30, 2007 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 1187 |
Zaphod3 |
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hAT DNA transposon from placental mammals. |
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Submitted: 30-Nov-2007 |
Accepted: 30-NOV-2007 |
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Key Words: hAT; DNA transposon; Transposable Element; DNA; Zaphod3; hAT-Tip100 |
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Source: Eutheria |
Organism: Eutheria |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia |
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Authors: Smit,A.F. |
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Title: Zaphod3 - hAT DNA transposon from placental mammals. |
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Journal: Repbase Reports 7(11), 1187-1187 (2007) |
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Abstract: ORF 821-2293 encodes a protein equally close (ca. 30% identity, 50% similarity) to the transposases of Zaphod and Arthur. Could call it Slarti, but am restraining myself. First couple of 100 AA are not in the consensus though a deletion or are very diverged (no ORF either). Very few copies contains pos 800-1100. Internal deletion products are named MER97a-d in the database. There either are a dozen or wo copies in the opossum genome, or a related element was active independently. Considering the relatively high (500-1000) number in eutherians, I'm considering it eutherian-specific.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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