Repbase Reports |
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| 2007, Volume 7, Issue 12 |
| December 31, 2007 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 1201 |
hAT6-1_SP |
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Sea urchin hAT6-1_SP autonomous DNA transposon - a consensus sequence. |
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Submitted: 31-Dec-2007 |
Accepted: 02-JAN-2008 |
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Key Words: hAT; DNA transposon; Transposable Element; 6-bp TSDs; hAT6 group; hAT6-1N1_SP; hAT6-1_SP |
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Source: Strongylocentrotus purpuratus |
Organism: Strongylocentrotus purpuratus |
Taxonomy: Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: hAT6 - a novel group of hAT DNA transposons characterized by 6-bp target site duplications. |
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Journal: Repbase Reports 7(12), 1201-1201 (2007) |
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Abstract: hAT6-1_SP is a young family of hAT DNA transposons and it belongs to a novel group of hAT transposons, called hAT6, generating 6-bp target site duplications upon their insertions into chromosomal DNA. The hAT6 transposase is remotely similar to the standard hAT transposase; identified hAT6 transposase sequences form a distinctive phylogenetic cluster. hAT6-1_SP is flanked by 13-bp TIRs and encodes a 713-aa transposase (2 exons). The transposase contains the C2H2 zinc finger motif present in diverse hAT transposase sequences encoded by different hAT transposons. hAT6-1N1_SP is a non-autonomous deletion derivate of hAT6-1_SP.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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