Repbase Reports |
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| 2007, Volume 7, Issue 7 |
| July 31, 2007 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 629 |
Penelope2_Dw |
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Penelope2 retrotransposon from D. willistoni - a consensus sequence. |
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Submitted: 25-Jul-2007 |
Accepted: 25-JUL-2007 |
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Key Words: Penelope; Non-LTR Retrotransposon; Transposable Element; retrotransposon; Penelope-like element; reverse transcriptase; GIY-YIG endonuclease; Penelope2_Dw |
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Source: Drosophila willistoni |
Organism: Drosophila willistoni |
Taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora; willistoni group; willistoni subgroup |
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Authors: Arkhipova,I.R. |
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Title: Penelope retrotransposons from Drosophila willistoni. |
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Journal: Repbase Reports 7(7), 629-629 (2007) |
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Abstract: Penelope2_Dw from Drosophila willistoni is 68% identical to Penelope from D. virilis, and 70% identical to Penelope1_Dw, another D. willistoni Penelope element. There are about 60 copies of Penelope2_Dw in the sequenced part of the D. willistoni genome, most of which differ from the consensus by 1-5% but can differ by as much as 10-15%. Most of the copies are 5'-truncated, and only one appears to be fully intact (AAQB01010750) and is arranged in a characteristic partial-tandem, forming "pseudo-LTRs".
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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