Repbase Reports

2008, Volume 8, Issue 12
December 31, 2008
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 1812

MuDR-2_TV

MuDR DNA transposon from Trichomonas vaginalis.

Submitted:
11-Dec-2008
Accepted:
11-DEC-2008
Key Words:
MuDR; DNA transposon; Transposable Element; MuDR-2_TV
Source:
Trichomonas vaginalis
Organism:
Trichomonas vaginalis
Taxonomy:
Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
[] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
MuDR DNA transposons from protozoans.
Journal:
Repbase Reports 8(12), 1812-1812 (2008)
Abstract:
The MuDR-2_TV consensus sequence was derived from multiple alignment of 10 copies that are <1% divergent from it. MuDR-2_TV copies are usually flanked by 10-bp TSDs (sometimes TSDs are 9 or 11 bp long; several copies are not flanked by TSDs). MuDR-2_TV contains imperfect 30-bp TIRs and codes for a 559-aa MuDR transposase. This sequence was derived from sequence data generated by TIGR Database: The Trichomonas vaginalis Genome Sequencing Project.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute