Repbase Reports
2008, Volume 8, Issue 4
April 30, 2008
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 402

DNA-4-3_NV

Starlet sea anemone DNA-4-3_NV non-autonomous DNA transposon - consensus.

Submitted:
30-Apr-2008 		Accepted:
30-APR-2008
Key Words:
DNA transposon; Transposable Element; DNA-4-3_NV
Source:
Nematostella vectensis 		Organism:
Nematostella vectensis 		Taxonomy:
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
[] Authors:
Kapitonov,V. and Jurka,J.
Title:
DNA-4-3_NV - a family of non-autonomous DNA transposons from the starlet sea anemone genome.
Journal:
Repbase Reports 8(4), 402-402 (2008)
Abstract:
DNA-4-3_NV elements are flanked by 4-bp targets site duplications. Termini of DNA-4-3_NV differs from elements that belong to the Chapaev, Kolobok and piggyBac superfamilies, which are also flanked by 4-bp TSDs. It is likely that DNA-4-3_NV belongs to a novel superfamily of DNA transposons, which also includes DNA-4-2_NV. In addition to 4-bp TSDs, these transposons are characterized by the 5'-GGC and GCC-3' termini.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Putnam,N.H., Srivastava,M., Hellsten,U., Dirks,B., Chapman,J., Salamov,A., Terry,A., Shapiro,H., Lindquist,E. et al.
    Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.
    Science 317(5834), 86-94 (2007)

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