Repbase Reports
2008, Volume 8, Issue 8
August 31, 2008
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 796

Harbinger-1_BF

Amphioxus Harbinger-1_BF autonomous DNA transposon - consensus.

Submitted:
04-Aug-2008 		Accepted:
04-AUG-2008
Key Words:
Harbinger; DNA transposon; Transposable Element; Harbinger-1_BF
Source:
Branchiostoma floridae 		Organism:
Branchiostoma floridae 		Taxonomy:
Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma
[] Authors:
Kapitonov,V. and Jurka,J.
Title:
Harbinger-1_BF - a family of autonomous DNA transposons from the amphioxus genome.
Journal:
Repbase Reports 8(8), 796-796 (2008)
Abstract:
This is a young family of autonomous Harbingers characterized by 15-bp TIRs and TAA TSDs. The consensus codes for two proteins: transposase (2 exons) and DNA/protein-binding SANT/Myb protein (4 exons).
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Putnam,N.H., Butts,T., Ferrier,D.E., Furlong,R.F., Hellsten,U., Kawashima,T., Robinson-Rechavi,M., Shoguchi,E. et al.
    The amphioxus genome and the evolution of the chordate karyotype.
    Nature 453(7198), 1064-1071 (2008)

© 2001-2024 - Genetic Information Research Institute