Repbase Reports |
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| 2009, Volume 9, Issue 12 |
| December 31, 2009 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3123 |
STR1 |
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SINE element - consensus. |
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Submitted: 16-Oct-2009 |
Accepted: 16-OCT-2009 |
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Key Words: SINE1/7SL; SINE; Non-LTR Retrotransposon; Transposable Element; Nonautonomous; STR1 |
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Source: Ictidomys tridecemlineatus |
Organism: Ictidomys tridecemlineatus |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys |
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Authors: Jurka,J. |
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Title: SINE elements from the thirteen-lined ground squirrel. |
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Journal: Repbase Reports 9(12), 3123-3123 (2009) |
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Abstract: This is a relatively old family. Its youngest sequences are >85% identical to consensus. The consensus sequence is similar to the 5'-end of STRIDE families (see STRIDE1-2). It appears that STRIDE families originated by a fusion of the STR1-like sequence with tRNA-derived STRID-like families (see STRID1-4) This sequence was derived from sequence data generated by Broad Institute Mammalian Genome Project.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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