Repbase Reports |
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| 2010, Volume 10, Issue 1 |
| January 31, 2010 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 108 |
Ambal-3_FCy |
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Ambal-3_FCy is a family of Ambal non-LTR retrotransposon - consensus. |
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Submitted: 26-Jan-2010 |
Accepted: 26-JAN-2010 |
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Key Words: Ambal; Non-LTR Retrotransposon; Transposable Element; Ambal-3_FCy |
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Source: Fragilariopsis cylindrus |
Organism: Fragilariopsis cylindrus |
Taxonomy: Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Fragilariopsis |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Ambal, a novel clade of non-LTR retrotransposons from diatoms. |
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Journal: Repbase Reports 10(1), 108-108 (2010) |
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Abstract: The Ambal-3_FCy consensus sequence was derived from 4 copies >99% identical to each other. Ambal-3_FCy is characterized by long 20-bp TSDs (also confirmed by one Ambal-3_FCy element inserted into a Copia-2-LTR_FCy sequence). We expect that this family is currently transposable. The consensus sequence was derived from sequence data produced by the US Department of Energy Joint Genome Institute http://www.jgi.doe.gov/ in collaboration with the user community.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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