Repbase Reports
2011, Volume 11, Issue 8
August 31, 2011
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 2305

Sagan-1_MLP

DNA transposon from Melampsora larici-populina - a consensus.

Submitted:
26-Apr-2011 		Accepted:
26-APR-2011
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Sagan-1_MLP
Source:
Melampsora larici-populina 		Organism:
Melampsora larici-populina 		Taxonomy:
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora
[] Authors:
Kojima,K.K. and Jurka,J.
Title:
Sagan, a new group of DNA transposons belonging to the Mariner/Tc1/IS630 superfamily.
Journal:
Repbase Reports 11(8), 2305-2305 (2011)
Abstract:
Sagan is a new group of DNA transposons belonging to the Mariner/Tc1/IS630 superfamily. But there is an insertion between D and E in the encoded DDE-transposase. The conserved DDE residues are D461, D510, and E690. 26-bp TIRs. The exon-intron structure is predicted with Softberry FGENESH.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Duplessis,S., Cuomo,C.A., Lin,Y.C., Aerts,A., Tisserant,E., Veneault-Fourrey,C., Joly,D.L., Hacquard,S. et al.
    From the Cover: Obligate biotrophy features unraveled by the genomic analysis of rust fungi.
    Proc Natl Acad Sci U S A 108(22), 9166-9171 (2011)

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