Repbase Reports
2012, Volume 12, Issue 10
October 31, 2012
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 2049

Mariner-7_XT

A family of Mariner/Tc1-type DNA transposons - consensus.

Submitted:
22-Mar-2011 		Accepted:
31-Oct-2012
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Mariner-7_XT
Source:
Xenopus tropicalis 		Organism:
Xenopus tropicalis 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
[] Authors:
Kojima,K.K. and Jurka,J.
Title:
Distant groups of Mariner/Tc1-type DNA transposons from vertebrates.
Journal:
Repbase Reports 12(10), 2049-2049 (2012)
Abstract:
~99% identical to consensus. 14-bp imperfect TIRs. This is specifically inserted into TTAA and appears to generate no TSDs. However the similarity to Mariner/Tc1-type transposase indicates that it makes TA TSDs and ends with CAG..CTG.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hellsten,U., Harland,R.M., Gilchrist,M.J., Hendrix,D., Jurka,J., Kapitonov,V., Ovcharenko,I., Putnam,N.H. et al.
    The genome of the Western clawed frog Xenopus tropicalis.
    Science 328(5978), 633-636 (2010)

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